Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 AC009093.7-201ENST00000623853 1223 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AC084121.4-201ENST00000641598 221 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AF228730.8-201ENST00000642140 221 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AL137784.3-201ENST00000623858 2288 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CNOT11Q9UKZ1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AC148477.4-201ENST00000613430 1793 ntBASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 HAUS4P1-201ENST00000406739 1145 ntBASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 PMS2P2-201ENST00000425039 1128 ntBASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 FAM58DP-201ENST00000428076 619 ntBASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT11Q9UKZ1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 UXT-AS1-201ENST00000590504 1525 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 MIR346-201ENST00000362234 95 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 KRT18P32-201ENST00000424695 1287 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 HLA-J-203ENST00000494367 1087 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AP000842.3-202ENST00000569238 1080 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AC073389.1-201ENST00000595595 795 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 C8orf49-201ENST00000525043 1968 ntBASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNOT11Q9UKZ1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms