Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AC007431.3-201ENST00000623221 587 ntBASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIP2Q9UDT6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC073347.1-201ENST00000421633 2643 ntBASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 CR383656.12-201ENST00000549567 513 ntBASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC138969.3-201ENST00000546612 1459 ntBASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC138932.2-201ENST00000548268 1459 ntBASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 AC126755.4-201ENST00000549796 1459 ntBASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP2Q9UDT6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 MIR648-201ENST00000385046 94 ntBASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 MYCLP2-201ENST00000449268 967 ntBASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 WASH4P-201ENST00000564273 1246 ntBASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP2Q9UDT6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms