Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 AC091951.1-201ENST00000512854 2465 ntBASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AL596257.1-201ENST00000641463 2694 ntBASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AC103702.1-201ENST00000548801 2630 ntBASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AL391069.4-201ENST00000609583 481 ntBASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AC004840.1-201ENST00000636359 365 ntBASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCSER1Q9C0I3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 DBET-201ENST00000630918 3363 ntBASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 AC022144.1-201ENST00000602255 1580 ntBASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 MIR770-201ENST00000390219 98 ntBASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 AC025181.2-201ENST00000606994 802 ntBASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCSER1Q9C0I3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms