Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 AL590326.2-201ENST00000625139 305 ntBASIC12.79□□□□□ -0.36
NKX6-2Q9C056 PGM5P2-202ENST00000637225 1043 ntBASIC12.79□□□□□ -0.36
NKX6-2Q9C056 AP006294.2-201ENST00000641667 209 ntBASIC12.79□□□□□ -0.36
NKX6-2Q9C056 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 AL031731.1-201ENST00000642131 2094 ntBASIC12.79□□□□□ -0.36
NKX6-2Q9C056 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX6-2Q9C056 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 NUS1P1-201ENST00000446295 882 ntBASIC12.78□□□□□ -0.36
NKX6-2Q9C056 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 TERC-201ENST00000602385 541 ntBASIC12.78□□□□□ -0.36
NKX6-2Q9C056 AC124864.1-201ENST00000623408 392 ntBASIC12.78□□□□□ -0.36
NKX6-2Q9C056 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 PCGF3-213ENST00000620529 1899 ntBASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX6-2Q9C056 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.77□□□□□ -0.36
NKX6-2Q9C056 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 AL512652.2-201ENST00000625156 1716 ntBASIC12.77□□□□□ -0.36
NKX6-2Q9C056 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX6-2Q9C056 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NKX6-2Q9C056 BX664615.1-201ENST00000443558 458 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms