Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 AC084364.1-201ENST00000551967 1556 ntBASIC18.57■□□□□ 0.56
NEK1Q96PY6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NEK1Q96PY6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.57■□□□□ 0.56
NEK1Q96PY6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AC009477.1-201ENST00000452936 217 ntBASIC18.56■□□□□ 0.56
NEK1Q96PY6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AL390955.2-201ENST00000603032 514 ntBASIC18.56■□□□□ 0.56
NEK1Q96PY6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.56■□□□□ 0.56
NEK1Q96PY6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEK1Q96PY6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AC126365.1-201ENST00000578585 1514 ntBASIC18.55■□□□□ 0.56
NEK1Q96PY6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AC009407.1-201ENST00000568958 598 ntBASIC18.55■□□□□ 0.56
NEK1Q96PY6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 AL390754.1-201ENST00000619088 582 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms