Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC97Q96F63 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC97Q96F63 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 GK-202ENST00000378941 458 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 SPDYE7P-202ENST00000420373 878 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 TSPY16P-201ENST00000449843 468 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 AC105233.2-201ENST00000523697 349 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 AF228730.5-201ENST00000530288 346 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 AC027307.3-201ENST00000594262 1100 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 AL358472.5-202ENST00000641448 1267 ntBASIC16.16■□□□□ 0.18
CCDC97Q96F63 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC97Q96F63 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC97Q96F63 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 AC002472.2-201ENST00000442739 958 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 AC125807.1-201ENST00000483097 614 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 IGHV3-62-201ENST00000520057 340 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 AC084121.4-201ENST00000641598 221 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 AF228730.8-201ENST00000642140 221 ntBASIC16.15■□□□□ 0.18
CCDC97Q96F63 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC97Q96F63 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC97Q96F63 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.14■□□□□ 0.18
CCDC97Q96F63 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CCDC97Q96F63 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC97Q96F63 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC97Q96F63 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC97Q96F63 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC97Q96F63 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC97Q96F63 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC97Q96F63 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms