Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 LINC00265-3P-201ENST00000447588 903 ntBASIC12.04□□□□□ -0.48
SMIM12Q96EX1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 AC012615.1-201ENST00000565797 1299 ntBASIC12.04□□□□□ -0.48
SMIM12Q96EX1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 AL031055.1-201ENST00000606362 631 ntBASIC12.04□□□□□ -0.48
SMIM12Q96EX1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.04□□□□□ -0.48
SMIM12Q96EX1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 AC023024.2-201ENST00000623561 1993 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 KRT16P4-201ENST00000453883 522 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 MIR4515-201ENST00000584082 81 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 AC006557.2-201ENST00000592985 1240 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 AL121956.5-201ENST00000625261 221 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 AC134407.2-201ENST00000625089 1978 ntBASIC12.03□□□□□ -0.48
SMIM12Q96EX1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM12Q96EX1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM12Q96EX1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms