Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SRD5A3P1-201ENST00000603021 949 ntBASIC12.69□□□□□ -0.38
LINC00311Q8N616 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LINC00311Q8N616 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC00311Q8N616 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AC135586.1-201ENST00000539323 574 ntBASIC12.68□□□□□ -0.38
LINC00311Q8N616 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AC025181.2-201ENST00000606994 802 ntBASIC12.68□□□□□ -0.38
LINC00311Q8N616 AL391069.4-201ENST00000609583 481 ntBASIC12.68□□□□□ -0.38
LINC00311Q8N616 AC008738.7-201ENST00000609744 511 ntBASIC12.68□□□□□ -0.38
LINC00311Q8N616 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00311Q8N616 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00311Q8N616 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms