Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 HLA-C-210ENST00000640219 976 ntBASIC21.19■□□□□ 0.98
XRN1Q8IZH2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 FKBP4P6-201ENST00000457486 1332 ntBASIC21.19■□□□□ 0.98
XRN1Q8IZH2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
XRN1Q8IZH2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 RPL18P13-201ENST00000478088 569 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AC007881.3-201ENST00000608897 607 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AL157813.1-201ENST00000612996 587 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 KLF2P1-201ENST00000447438 1042 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 RN7SL67P-201ENST00000492147 296 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
XRN1Q8IZH2 TBC1D3J-201ENST00000620719 1426 ntBASIC21.18■□□□□ 0.98
XRN1Q8IZH2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 AC244394.1-201ENST00000435000 1665 ntBASIC21.17■□□□□ 0.98
XRN1Q8IZH2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 AC103691.2-201ENST00000618824 433 ntBASIC21.17■□□□□ 0.98
XRN1Q8IZH2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 MBLAC2-202ENST00000514906 1936 ntBASIC21.17■□□□□ 0.98
XRN1Q8IZH2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
XRN1Q8IZH2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 INE2-201ENST00000630399 1874 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 CAP2P1-201ENST00000557743 1390 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 RN7SKP230-201ENST00000365642 335 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AC078875.1-201ENST00000431907 724 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AC078991.1-201ENST00000437297 610 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AC026434.2-201ENST00000506094 1078 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 IGHV3-37-201ENST00000518544 340 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 RPL17P45-201ENST00000586289 509 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 AC242376.2-201ENST00000619355 883 ntBASIC21.16■□□□□ 0.98
XRN1Q8IZH2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
XRN1Q8IZH2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms