Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 C18orf15-201ENST00000623680 2534 ntBASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF440Q8IYI8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 FAM86GP-201ENST00000448322 971 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 SDHAP3-202ENST00000515467 728 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AC051619.7-201ENST00000568314 623 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AC074044.1-201ENST00000609673 707 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AL138828.2-201ENST00000615812 383 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.36□□□□□ -0.11
ZNF440Q8IYI8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 AL133267.1-201ENST00000398220 340 ntBASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.35□□□□□ -0.11
ZNF440Q8IYI8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms