Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 FO393414.2-201ENST00000405153 598 ntBASIC14.54□□□□□ -0.08
VRK2Q86Y07 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 AL035456.1-201ENST00000456064 1369 ntBASIC14.54□□□□□ -0.08
VRK2Q86Y07 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 AC148477.4-201ENST00000613430 1793 ntBASIC14.54□□□□□ -0.08
VRK2Q86Y07 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 AC023024.2-201ENST00000623561 1993 ntBASIC14.53□□□□□ -0.08
VRK2Q86Y07 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 AC126365.1-201ENST00000578585 1514 ntBASIC14.53□□□□□ -0.08
VRK2Q86Y07 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 KRT8P12-202ENST00000472924 1397 ntBASIC14.53□□□□□ -0.08
VRK2Q86Y07 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 AP001059.3-201ENST00000619053 235 ntBASIC14.53□□□□□ -0.08
VRK2Q86Y07 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VRK2Q86Y07 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VRK2Q86Y07 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms