Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 RPSAP52-203ENST00000622976 1023 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 AL033527.5-201ENST00000641382 801 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
CTR9Q6PD62 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTR9Q6PD62 AP005117.1-202ENST00000581724 1908 ntBASIC18.61■□□□□ 0.57
CTR9Q6PD62 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AC011495.1-201ENST00000498085 584 ntBASIC18.6■□□□□ 0.57
CTR9Q6PD62 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AL359711.2-201ENST00000563105 872 ntBASIC18.6■□□□□ 0.57
CTR9Q6PD62 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AC015910.1-201ENST00000579400 975 ntBASIC18.6■□□□□ 0.57
CTR9Q6PD62 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTR9Q6PD62 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.6■□□□□ 0.57
CTR9Q6PD62 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.59■□□□□ 0.57
CTR9Q6PD62 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 GIMAP3P-201ENST00000495150 836 ntBASIC18.59■□□□□ 0.57
CTR9Q6PD62 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 AL049840.4-201ENST00000602422 811 ntBASIC18.59■□□□□ 0.57
CTR9Q6PD62 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.59■□□□□ 0.57
CTR9Q6PD62 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTR9Q6PD62 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTR9Q6PD62 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTR9Q6PD62 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTR9Q6PD62 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms