Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 AL139385.1-201ENST00000611744 3272 ntBASIC15.23■□□□□ 0.03
RNF220Q5VTB9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
RNF220Q5VTB9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 AL513480.1-201ENST00000451731 511 ntBASIC15.22■□□□□ 0.03
RNF220Q5VTB9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF220Q5VTB9 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CRYGEP-201ENST00000412192 528 ntBASIC15.21■□□□□ 0.03
RNF220Q5VTB9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 HCG4B-203ENST00000450128 991 ntBASIC15.21■□□□□ 0.03
RNF220Q5VTB9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 AC118758.2-201ENST00000614242 2813 ntBASIC15.21■□□□□ 0.03
RNF220Q5VTB9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF220Q5VTB9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF220Q5VTB9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF220Q5VTB9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF220Q5VTB9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF220Q5VTB9 AC148477.4-201ENST00000613430 1793 ntBASIC15.21■□□□□ 0.02
RNF220Q5VTB9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF220Q5VTB9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms