Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC020658.6-201ENST00000623564 1870 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AC245100.5-201ENST00000452108 331 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AC097493.3-201ENST00000509725 367 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AL355385.1-201ENST00000606123 409 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AL138828.2-201ENST00000615812 383 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 AC007191.1-201ENST00000623179 2995 ntBASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KHDC1Q4VXA5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 AC069120.2-201ENST00000524091 540 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 AL035456.1-201ENST00000456064 1369 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 LINC00528-201ENST00000600723 2160 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CICP23-201ENST00000605013 2741 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 AL691432.1-201ENST00000596308 1422 ntBASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KHDC1Q4VXA5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 AC134407.2-201ENST00000625089 1978 ntBASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
KHDC1Q4VXA5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms