Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SREBF2Q12772 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
SREBF2Q12772 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.7■□□□□ 0.42
SREBF2Q12772 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SREBF2Q12772 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SREBF2Q12772 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SREBF2Q12772 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.7■□□□□ 0.42
SREBF2Q12772 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.69■□□□□ 0.42
SREBF2Q12772 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.69■□□□□ 0.42
SREBF2Q12772 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 RNF216P1-203ENST00000404404 2427 ntBASIC17.69■□□□□ 0.42
SREBF2Q12772 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.69■□□□□ 0.42
SREBF2Q12772 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 RN7SKP214-201ENST00000364208 315 ntBASIC17.69■□□□□ 0.42
SREBF2Q12772 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.69■□□□□ 0.42
SREBF2Q12772 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SREBF2Q12772 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SREBF2Q12772 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 AC005324.6-201ENST00000587972 613 ntBASIC17.69■□□□□ 0.42
SREBF2Q12772 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SREBF2Q12772 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SREBF2Q12772 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.68■□□□□ 0.42
SREBF2Q12772 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 AC139713.2-201ENST00000641328 2723 ntBASIC17.68■□□□□ 0.42
SREBF2Q12772 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.68■□□□□ 0.42
SREBF2Q12772 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.68■□□□□ 0.42
SREBF2Q12772 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.68■□□□□ 0.42
SREBF2Q12772 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.68■□□□□ 0.42
SREBF2Q12772 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.68■□□□□ 0.42
SREBF2Q12772 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.68■□□□□ 0.42
SREBF2Q12772 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.68■□□□□ 0.42
SREBF2Q12772 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.68■□□□□ 0.42
SREBF2Q12772 AL162426.1-201ENST00000624141 743 ntBASIC17.68■□□□□ 0.42
SREBF2Q12772 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.68■□□□□ 0.42
SREBF2Q12772 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.68■□□□□ 0.42
SREBF2Q12772 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SREBF2Q12772 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SREBF2Q12772 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.67■□□□□ 0.42
SREBF2Q12772 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SREBF2Q12772 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SREBF2Q12772 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 RPL13AP19-201ENST00000434320 584 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.67■□□□□ 0.42
SREBF2Q12772 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.67■□□□□ 0.42
SREBF2Q12772 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 AC100827.2-201ENST00000563214 1194 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 AC132192.2-201ENST00000596206 1147 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.67■□□□□ 0.42
SREBF2Q12772 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 AC138466.3-201ENST00000619983 221 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 AC009084.3-201ENST00000623356 437 ntBASIC17.67■□□□□ 0.42
SREBF2Q12772 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.67■□□□□ 0.42
SREBF2Q12772 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SREBF2Q12772 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SREBF2Q12772 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.67■□□□□ 0.42
SREBF2Q12772 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms