Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.85□□□□□ -0.19
SEC61A1P61619 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 AC005237.2-201ENST00000434368 219 ntBASIC13.85□□□□□ -0.19
SEC61A1P61619 SPCS2P4-201ENST00000436160 681 ntBASIC13.85□□□□□ -0.19
SEC61A1P61619 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 AC069335.1-201ENST00000489972 472 ntBASIC13.85□□□□□ -0.19
SEC61A1P61619 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.85□□□□□ -0.19
SEC61A1P61619 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
SEC61A1P61619 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 SBF1P1-201ENST00000444527 5631 ntBASIC13.85□□□□□ -0.19
SEC61A1P61619 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SEC61A1P61619 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SEC61A1P61619 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.85□□□□□ -0.19
SEC61A1P61619 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 REXO1L8P-201ENST00000604378 1897 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 WASH6P-202ENST00000359512 1437 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC61A1P61619 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SEC61A1P61619 PMS2P4-201ENST00000412466 1052 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC61A1P61619 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC61A1P61619 AC109322.1-201ENST00000524499 1264 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.84□□□□□ -0.19
SEC61A1P61619 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.84□□□□□ -0.19
SEC61A1P61619 MIR3909-201ENST00000579518 119 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.84□□□□□ -0.19
SEC61A1P61619 AKAP8P1-201ENST00000434743 1349 ntBASIC13.84□□□□□ -0.19
SEC61A1P61619 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SEC61A1P61619 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.84□□□□□ -0.19
SEC61A1P61619 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms