Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 MRPS18AP1-201ENST00000414458 589 ntBASIC11.69□□□□□ -0.54
CMC4P56277 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.69□□□□□ -0.54
CMC4P56277 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.69□□□□□ -0.54
CMC4P56277 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CMC4P56277 AC015910.1-201ENST00000579400 975 ntBASIC11.69□□□□□ -0.54
CMC4P56277 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.69□□□□□ -0.54
CMC4P56277 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.69□□□□□ -0.54
CMC4P56277 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CMC4P56277 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CMC4P56277 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.69□□□□□ -0.54
CMC4P56277 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.68□□□□□ -0.54
CMC4P56277 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CMC4P56277 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.68□□□□□ -0.54
CMC4P56277 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.68□□□□□ -0.54
CMC4P56277 HMGN1P19-201ENST00000436976 333 ntBASIC11.68□□□□□ -0.54
CMC4P56277 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.68□□□□□ -0.54
CMC4P56277 MIR3197-201ENST00000582241 73 ntBASIC11.68□□□□□ -0.54
CMC4P56277 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.68□□□□□ -0.54
CMC4P56277 AC004840.1-201ENST00000636359 365 ntBASIC11.68□□□□□ -0.54
CMC4P56277 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CMC4P56277 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.68□□□□□ -0.54
CMC4P56277 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.68□□□□□ -0.54
CMC4P56277 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CMC4P56277 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CMC4P56277 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms