Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 AL442647.2-201ENST00000429864 857 ntBASIC17.1■□□□□ 0.33
NCKAP1LP55160 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 AC104596.2-201ENST00000512793 793 ntBASIC17.1■□□□□ 0.33
NCKAP1LP55160 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 DRD5P1-201ENST00000456605 1438 ntBASIC17.1■□□□□ 0.33
NCKAP1LP55160 PPT1-215ENST00000641471 2368 ntBASIC17.1■□□□□ 0.33
NCKAP1LP55160 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCKAP1LP55160 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NCKAP1LP55160 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 FER1L4-210ENST00000615531 5998 ntBASIC17.09■□□□□ 0.33
NCKAP1LP55160 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC026410.3-201ENST00000514280 936 ntBASIC17.09■□□□□ 0.33
NCKAP1LP55160 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 CTBP2P3-201ENST00000585629 1255 ntBASIC17.09■□□□□ 0.33
NCKAP1LP55160 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 AL645728.2-202ENST00000641679 227 ntBASIC17.09■□□□□ 0.33
NCKAP1LP55160 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
NCKAP1LP55160 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1LP55160 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKAP1LP55160 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms