Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GRIA1P42261 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GRIA1P42261 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 CICP11-201ENST00000434745 2827 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
GRIA1P42261 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 RPL37AP1-201ENST00000412502 279 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.92■□□□□ 0.14
GRIA1P42261 KRT18P64-201ENST00000434946 1219 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 AC004967.1-201ENST00000453589 447 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.92■□□□□ 0.14
GRIA1P42261 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 AL589739.1-201ENST00000607720 493 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 LINC00628-201ENST00000628516 1289 ntBASIC15.92■□□□□ 0.14
GRIA1P42261 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GRIA1P42261 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GRIA1P42261 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
GRIA1P42261 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.91■□□□□ 0.14
GRIA1P42261 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.91■□□□□ 0.14
GRIA1P42261 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.91■□□□□ 0.14
GRIA1P42261 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 AC069262.1-201ENST00000539058 672 ntBASIC15.91■□□□□ 0.14
GRIA1P42261 SNHG9-202ENST00000564014 471 ntBASIC15.91■□□□□ 0.14
GRIA1P42261 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.91■□□□□ 0.14
GRIA1P42261 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.91■□□□□ 0.14
GRIA1P42261 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.91■□□□□ 0.14
GRIA1P42261 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GRIA1P42261 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
GRIA1P42261 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.91■□□□□ 0.14
GRIA1P42261 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GRIA1P42261 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GRIA1P42261 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GRIA1P42261 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms