Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 AP002414.3-201ENST00000589352 1468 ntBASIC15.06■□□□□ 0
MSX2P35548 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MSX2P35548 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MSX2P35548 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.06■□□□□ 0
MSX2P35548 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.06■□□□□ 0
MSX2P35548 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MSX2P35548 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.06■□□□□ 0
MSX2P35548 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MSX2P35548 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 REXO1L1P-202ENST00000608646 1974 ntBASIC15.05■□□□□ 0
MSX2P35548 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.05■□□□□ 0
MSX2P35548 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.05■□□□□ 0
MSX2P35548 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 AC027601.5-201ENST00000624065 2482 ntBASIC15.05■□□□□ 0
MSX2P35548 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
MSX2P35548 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.05■□□□□ -0
MSX2P35548 AKR1C7P-201ENST00000305623 895 ntBASIC15.05■□□□□ -0
MSX2P35548 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.05■□□□□ -0
MSX2P35548 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.05■□□□□ -0
MSX2P35548 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MSX2P35548 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MSX2P35548 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.05■□□□□ -0
MSX2P35548 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.05■□□□□ -0
MSX2P35548 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.05■□□□□ -0
MSX2P35548 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.05■□□□□ -0
MSX2P35548 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.05■□□□□ -0
MSX2P35548 AC002347.1-201ENST00000569543 541 ntBASIC15.05■□□□□ -0
MSX2P35548 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
MSX2P35548 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
MSX2P35548 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.05■□□□□ -0
MSX2P35548 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.05■□□□□ -0
MSX2P35548 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MSX2P35548 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
MSX2P35548 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MSX2P35548 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.05■□□□□ -0
MSX2P35548 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MSX2P35548 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.04■□□□□ -0
MSX2P35548 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.04■□□□□ -0
MSX2P35548 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MSX2P35548 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MSX2P35548 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.04■□□□□ -0
MSX2P35548 OR2I1P-209ENST00000641730 5365 ntBASIC15.04■□□□□ -0
MSX2P35548 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MSX2P35548 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MSX2P35548 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
MSX2P35548 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.04■□□□□ -0
MSX2P35548 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.04■□□□□ -0
MSX2P35548 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
MSX2P35548 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.04■□□□□ -0
MSX2P35548 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MSX2P35548 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.04■□□□□ -0
MSX2P35548 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.04■□□□□ -0
MSX2P35548 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.04■□□□□ -0
MSX2P35548 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.04■□□□□ -0
MSX2P35548 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms