Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC8P31273 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC8P31273 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HOXC8P31273 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.85■□□□□ 0.29
HOXC8P31273 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.85■□□□□ 0.29
HOXC8P31273 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.85■□□□□ 0.29
HOXC8P31273 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 ZACNP1-201ENST00000612259 710 ntBASIC16.85■□□□□ 0.29
HOXC8P31273 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC8P31273 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HOXC8P31273 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HOXC8P31273 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HOXC8P31273 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 AC010491.1-201ENST00000563101 2797 ntBASIC16.84■□□□□ 0.29
HOXC8P31273 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 AL391280.1-201ENST00000506969 1062 ntBASIC16.84■□□□□ 0.29
HOXC8P31273 AC126915.1-201ENST00000522847 1038 ntBASIC16.84■□□□□ 0.29
HOXC8P31273 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXC8P31273 PPY2P-201ENST00000582808 702 ntBASIC16.84■□□□□ 0.29
HOXC8P31273 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXC8P31273 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC8P31273 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXC8P31273 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC8P31273 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 AC009090.5-201ENST00000624886 2285 ntBASIC16.84■□□□□ 0.29
HOXC8P31273 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC8P31273 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC8P31273 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXC8P31273 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.83■□□□□ 0.28
HOXC8P31273 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HOXC8P31273 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HOXC8P31273 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC8P31273 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXC8P31273 ACTG1P17-201ENST00000558391 1119 ntBASIC16.83■□□□□ 0.28
HOXC8P31273 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 OR10B1P-201ENST00000601666 907 ntBASIC16.83■□□□□ 0.28
HOXC8P31273 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.83■□□□□ 0.28
HOXC8P31273 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC8P31273 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC8P31273 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms