Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA3P29320 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA3P29320 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA3P29320 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA3P29320 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA3P29320 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.33■□□□□ 0.04
EPHA3P29320 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA3P29320 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHA3P29320 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA3P29320 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHA3P29320 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA3P29320 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHA3P29320 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHA3P29320 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EPHA3P29320 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 AC117489.1-201ENST00000625169 3217 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EPHA3P29320 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EPHA3P29320 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
EPHA3P29320 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 AC093909.1-201ENST00000504731 1122 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 AC079776.4-201ENST00000511039 504 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 RNA5SP419-201ENST00000515908 135 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 AC105233.2-201ENST00000523697 349 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
EPHA3P29320 AF228730.5-201ENST00000530288 346 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.32■□□□□ 0.04
EPHA3P29320 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA3P29320 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHA3P29320 AC068137.2-201ENST00000605408 478 ntBASIC15.32■□□□□ 0.04
EPHA3P29320 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
EPHA3P29320 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
EPHA3P29320 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHA3P29320 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHA3P29320 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
EPHA3P29320 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EPHA3P29320 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
EPHA3P29320 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHA3P29320 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms