Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 GSAP-213ENST00000491796 2618 ntTSL 1 (best)10.04□□□□□ -0.82e-10■■■□□ 14.8
U2AF2P26368 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.05□□□□□ -2.082e-10■■■□□ 14.8
U2AF2P26368 ENOSF1-220ENST00000584706 616 ntTSL 311.14□□□□□ -0.632e-8■■■□□ 14.8
U2AF2P26368 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC14.55□□□□□ -0.084e-7■■■□□ 14.7
U2AF2P26368 FOXN3-212ENST00000556541 388 ntTSL 312.93□□□□□ -0.342e-12■■■□□ 14.7
U2AF2P26368 FOXN3-207ENST00000555010 340 ntTSL 53.05□□□□□ -1.922e-12■■■□□ 14.7
U2AF2P26368 FOXN3-216ENST00000557496 228 ntTSL 50.23□□□□□ -2.372e-12■■■□□ 14.7
U2AF2P26368 PCM1-213ENST00000519802 796 ntTSL 22.85□□□□□ -1.953e-8■■■□□ 14.7
U2AF2P26368 PCM1-208ENST00000518877 316 ntTSL 30.79□□□□□ -2.283e-8■■■□□ 14.7
U2AF2P26368 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.241e-7■■■□□ 14.7
U2AF2P26368 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.75□□□□□ -0.051e-7■■■□□ 14.7
U2AF2P26368 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.131e-7■■■□□ 14.7
U2AF2P26368 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.861e-6■■■□□ 14.7
U2AF2P26368 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.091e-6■■■□□ 14.7
U2AF2P26368 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.161e-6■■■□□ 14.7
U2AF2P26368 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.52■□□□□ 0.072e-7■■■□□ 14.7
U2AF2P26368 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.442e-7■■■□□ 14.7
U2AF2P26368 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 527.29■■□□□ 1.964e-13■■■□□ 14.7
U2AF2P26368 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.224e-13■■■□□ 14.7
U2AF2P26368 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.854e-13■■■□□ 14.7
U2AF2P26368 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.032e-10■■■□□ 14.7
U2AF2P26368 TTC19-203ENST00000466729 908 ntTSL 525.23■■□□□ 1.632e-7■■■□□ 14.7
U2AF2P26368 NEK3-202ENST00000550841 569 ntTSL 424.4■■□□□ 1.51e-10■■■□□ 14.7
U2AF2P26368 ARID1B-221ENST00000636940 5910 ntTSL 511.04□□□□□ -0.647e-9■■■□□ 14.7
U2AF2P26368 ARID1B-229ENST00000637741 3915 ntTSL 58.77□□□□□ -17e-9■■■□□ 14.7
U2AF2P26368 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.44■■■□□ 2.142e-8■■■□□ 14.7
U2AF2P26368 OXSR1-202ENST00000426620 1581 ntTSL 1 (best)28.38■■■□□ 2.132e-8■■■□□ 14.7
U2AF2P26368 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.642e-8■■■□□ 14.7
U2AF2P26368 ABCA5-207ENST00000588665 560 ntTSL 523.16■■□□□ 1.32e-8■■■□□ 14.7
U2AF2P26368 DPH7-210ENST00000479650 1797 ntTSL 521.46■■□□□ 1.032e-8■■■□□ 14.7
U2AF2P26368 DPH7-213ENST00000491359 999 ntTSL 220.78■□□□□ 0.922e-8■■■□□ 14.7
U2AF2P26368 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.832e-8■■■□□ 14.7
U2AF2P26368 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.51■□□□□ 0.712e-8■■■□□ 14.7
U2AF2P26368 STARD4-204ENST00000502931 838 ntTSL 219.17■□□□□ 0.662e-8■■■□□ 14.7
U2AF2P26368 TNRC6B-204ENST00000441751 415 ntTSL 518.73■□□□□ 0.592e-8■■■□□ 14.7
U2AF2P26368 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.592e-8■■■□□ 14.7
U2AF2P26368 STARD4-209ENST00000511137 1135 ntTSL 218.2■□□□□ 0.52e-8■■■□□ 14.7
U2AF2P26368 DPH7-207ENST00000475100 919 ntTSL 317.99■□□□□ 0.472e-8■■■□□ 14.7
U2AF2P26368 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 517.67■□□□□ 0.422e-8■■■□□ 14.7
U2AF2P26368 DPH7-208ENST00000476303 922 ntTSL 1 (best)17.35■□□□□ 0.372e-8■■■□□ 14.7
U2AF2P26368 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.3■□□□□ 0.362e-8■■■□□ 14.7
U2AF2P26368 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.29■□□□□ 0.362e-8■■■□□ 14.7
U2AF2P26368 DPH7-202ENST00000460572 394 ntTSL 517.22■□□□□ 0.352e-8■■■□□ 14.7
U2AF2P26368 DPH7-206ENST00000472113 1414 ntTSL 516.95■□□□□ 0.32e-8■■■□□ 14.7
U2AF2P26368 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.272e-8■■■□□ 14.7
U2AF2P26368 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.242e-8■■■□□ 14.7
U2AF2P26368 ABCA5-212ENST00000592568 616 ntTSL 315.84■□□□□ 0.132e-8■■■□□ 14.7
U2AF2P26368 B3GNTL1-206ENST00000571954 881 ntTSL 515.6■□□□□ 0.096e-16■■■□□ 14.7
U2AF2P26368 DPH7-204ENST00000467768 750 ntTSL 515.06■□□□□ 02e-8■■■□□ 14.7
U2AF2P26368 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC14.29□□□□□ -0.122e-8■■■□□ 14.7
U2AF2P26368 ABCA5-213ENST00000593153 3017 ntTSL 213.54□□□□□ -0.242e-8■■■□□ 14.7
U2AF2P26368 B3GNTL1-203ENST00000571218 459 ntTSL 213.34□□□□□ -0.276e-16■■■□□ 14.7
U2AF2P26368 ACSS2-219ENST00000490464 280 ntTSL 312.6□□□□□ -0.392e-8■■■□□ 14.7
U2AF2P26368 DPH7-211ENST00000481839 798 ntTSL 312.3□□□□□ -0.442e-8■■■□□ 14.7
U2AF2P26368 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC11.61□□□□□ -0.552e-8■■■□□ 14.7
U2AF2P26368 MYO19-205ENST00000611063 582 ntTSL 411.25□□□□□ -0.612e-8■■■□□ 14.7
U2AF2P26368 DPH7-205ENST00000470855 479 ntTSL 510.6□□□□□ -0.712e-8■■■□□ 14.7
U2AF2P26368 B3GNTL1-210ENST00000573629 423 ntTSL 310.44□□□□□ -0.746e-16■■■□□ 14.7
U2AF2P26368 ZKSCAN8-204ENST00000606198 2057 ntTSL 1 (best)9.98□□□□□ -0.812e-8■■■□□ 14.7
U2AF2P26368 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.892e-8■■■□□ 14.7
U2AF2P26368 SEC23IP-203ENST00000446561 582 ntTSL 38.77□□□□□ -1.012e-8■■■□□ 14.7
U2AF2P26368 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.38□□□□□ -1.072e-8■■■□□ 14.7
U2AF2P26368 ABCA5-214ENST00000593253 1695 ntTSL 1 (best)8.09□□□□□ -1.112e-8■■■□□ 14.7
U2AF2P26368 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.82□□□□□ -1.162e-8■■■□□ 14.7
U2AF2P26368 SEC23IP-204ENST00000462222 552 ntTSL 37.78□□□□□ -1.162e-8■■■□□ 14.7
U2AF2P26368 TTLL4-208ENST00000436668 738 ntTSL 57.53□□□□□ -1.22e-8■■■□□ 14.7
U2AF2P26368 ZKSCAN8-203ENST00000536028 1052 ntTSL 27.43□□□□□ -1.222e-8■■■□□ 14.7
U2AF2P26368 ABCA5-205ENST00000587607 804 ntTSL 1 (best)5.99□□□□□ -1.452e-8■■■□□ 14.7
U2AF2P26368 TTLL4-216ENST00000472527 544 ntTSL 25.57□□□□□ -1.522e-8■■■□□ 14.7
U2AF2P26368 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.542e-8■■■□□ 14.7
U2AF2P26368 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.582e-8■■■□□ 14.7
U2AF2P26368 OXSR1-205ENST00000483695 769 ntTSL 25.16□□□□□ -1.582e-8■■■□□ 14.7
U2AF2P26368 UBR1-208ENST00000569066 2250 ntTSL 1 (best)5.09□□□□□ -1.592e-8■■■□□ 14.7
U2AF2P26368 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.54□□□□□ -1.682e-8■■■□□ 14.7
U2AF2P26368 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.742e-8■■■□□ 14.7
U2AF2P26368 RBM5-217ENST00000474818 832 ntTSL 33.45□□□□□ -1.861e-6■■■□□ 14.7
U2AF2P26368 TTLL4-205ENST00000417855 601 ntTSL 32.33□□□□□ -2.042e-8■■■□□ 14.7
U2AF2P26368 UBR1-205ENST00000564540 735 ntTSL 32.29□□□□□ -2.042e-8■■■□□ 14.7
U2AF2P26368 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.192e-8■■■□□ 14.7
U2AF2P26368 UBR1-209ENST00000569243 702 ntTSL 31.29□□□□□ -2.22e-8■■■□□ 14.7
U2AF2P26368 FXR2-204ENST00000573057 675 ntTSL 213.64□□□□□ -0.231e-11■■■□□ 14.7
U2AF2P26368 HM13-223ENST00000496438 699 ntTSL 514.21□□□□□ -0.131e-7■■■□□ 14.7
U2AF2P26368 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.042e-6■■■□□ 14.7
U2AF2P26368 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.652e-6■■■□□ 14.7
U2AF2P26368 CDK5RAP2-217ENST00000484546 1269 ntTSL 1 (best)13.19□□□□□ -0.31e-30■■■□□ 14.7
U2AF2P26368 CDK5RAP2-213ENST00000480467 931 ntTSL 311.67□□□□□ -0.541e-30■■■□□ 14.7
U2AF2P26368 CDK5RAP2-206ENST00000433194 815 ntTSL 311.47□□□□□ -0.571e-30■■■□□ 14.7
U2AF2P26368 CDK5RAP2-219ENST00000495406 635 ntTSL 211.46□□□□□ -0.571e-30■■■□□ 14.7
U2AF2P26368 CDK5RAP2-210ENST00000474262 549 ntTSL 29.96□□□□□ -0.821e-30■■■□□ 14.7
U2AF2P26368 C1RL-203ENST00000534950 582 ntTSL 320.4■□□□□ 0.866e-10■■■□□ 14.7
U2AF2P26368 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.79■□□□□ 0.66e-10■■■□□ 14.7
U2AF2P26368 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.076e-10■■■□□ 14.7
U2AF2P26368 C1RL-204ENST00000534969 532 ntTSL 312.85□□□□□ -0.356e-10■■■□□ 14.7
U2AF2P26368 C1RL-205ENST00000537833 561 ntTSL 312.85□□□□□ -0.356e-10■■■□□ 14.7
U2AF2P26368 C1RL-208ENST00000543933 592 ntTSL 512.6□□□□□ -0.396e-10■■■□□ 14.7
U2AF2P26368 C1RL-206ENST00000539803 1038 ntTSL 511.61□□□□□ -0.556e-10■■■□□ 14.7
U2AF2P26368 C1RL-211ENST00000545280 449 ntTSL 3 BASIC11.13□□□□□ -0.636e-10■■■□□ 14.7
U2AF2P26368 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.464e-7■■■□□ 14.7
U2AF2P26368 TCF12-224ENST00000561346 852 ntTSL 27.56□□□□□ -1.24e-6■■■□□ 14.7
U2AF2P26368 TCF12-211ENST00000559216 475 ntTSL 46.24□□□□□ -1.414e-6■■■□□ 14.7
Retrieved 100 of 36,523 protein–RNA pairs in 232.3 ms