RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
PCM1-213ENST00000519802 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
PCM1-213ENST00000519802 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
PCM1-213ENST00000519802 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
PCM1-213ENST00000519802 FOXD1Q16676 465 aa23.93■■□□□ 1.42
PCM1-213ENST00000519802 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
PCM1-213ENST00000519802 MSH5O43196 834 aa22.41■■□□□ 1.18
PCM1-213ENST00000519802 PIAS4Q8N2W9 510 aaPredicted RBP22.33■■□□□ 1.17
PCM1-213ENST00000519802 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
PCM1-213ENST00000519802 ADRA2BP18089 450 aa22.25■■□□□ 1.15
PCM1-213ENST00000519802 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
PCM1-213ENST00000519802 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
PCM1-213ENST00000519802 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
PCM1-213ENST00000519802 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
PCM1-213ENST00000519802 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
PCM1-213ENST00000519802 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
PCM1-213ENST00000519802 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
PCM1-213ENST00000519802 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
PCM1-213ENST00000519802 RNF216Q9NWF9 866 aaPredicted RBP19.41■□□□□ 0.7
PCM1-213ENST00000519802 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
PCM1-213ENST00000519802 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
PCM1-213ENST00000519802 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
PCM1-213ENST00000519802 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
PCM1-213ENST00000519802 NPM3O75607 178 aaKnown RBP18.87■□□□□ 0.61
PCM1-213ENST00000519802 C1QBPQ07021 282 aaKnown RBP18.84■□□□□ 0.61
PCM1-213ENST00000519802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.577e-10■■■■□ 19.5
PCM1-213ENST00000519802 KCNA4P22459 653 aa18.46■□□□□ 0.55
PCM1-213ENST00000519802 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
PCM1-213ENST00000519802 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
PCM1-213ENST00000519802 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
PCM1-213ENST00000519802 CAPN15O75808 1086 aa17.96■□□□□ 0.47
PCM1-213ENST00000519802 DSG3P32926 999 aa17.89■□□□□ 0.45
PCM1-213ENST00000519802 APLP2Q06481 763 aa17.72■□□□□ 0.43
PCM1-213ENST00000519802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
PCM1-213ENST00000519802 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
PCM1-213ENST00000519802 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
PCM1-213ENST00000519802 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
PCM1-213ENST00000519802 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
PCM1-213ENST00000519802 ABCB7O75027 752 aa17.55■□□□□ 0.4
PCM1-213ENST00000519802 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
PCM1-213ENST00000519802 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
PCM1-213ENST00000519802 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
PCM1-213ENST00000519802 POTEHQ6S545 545 aa17.21■□□□□ 0.35
PCM1-213ENST00000519802 POLA2Q14181 598 aa17.18■□□□□ 0.34
PCM1-213ENST00000519802 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
PCM1-213ENST00000519802 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
PCM1-213ENST00000519802 ZBTB22O15209 634 aa16.99■□□□□ 0.31
PCM1-213ENST00000519802 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
PCM1-213ENST00000519802 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
PCM1-213ENST00000519802 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
PCM1-213ENST00000519802 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
PCM1-213ENST00000519802 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
PCM1-213ENST00000519802 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
PCM1-213ENST00000519802 FBLN2P98095 1184 aa16.38■□□□□ 0.21
PCM1-213ENST00000519802 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
PCM1-213ENST00000519802 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
PCM1-213ENST00000519802 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
PCM1-213ENST00000519802 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
PCM1-213ENST00000519802 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
PCM1-213ENST00000519802 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
PCM1-213ENST00000519802 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.194e-7■■■□□ 18.1
PCM1-213ENST00000519802 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
PCM1-213ENST00000519802 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
PCM1-213ENST00000519802 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
PCM1-213ENST00000519802 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
PCM1-213ENST00000519802 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
PCM1-213ENST00000519802 HAX1O00165 279 aa16.01■□□□□ 0.15
PCM1-213ENST00000519802 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
PCM1-213ENST00000519802 PRKAR2AP13861 404 aaKnown RBP15.9■□□□□ 0.14
PCM1-213ENST00000519802 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
PCM1-213ENST00000519802 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCM1-213ENST00000519802 EVX2Q03828 476 aa15.83■□□□□ 0.12
PCM1-213ENST00000519802 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
PCM1-213ENST00000519802 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
PCM1-213ENST00000519802 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
PCM1-213ENST00000519802 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
PCM1-213ENST00000519802 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
PCM1-213ENST00000519802 GABBR2O75899 941 aa15.47■□□□□ 0.07
PCM1-213ENST00000519802 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
PCM1-213ENST00000519802 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
PCM1-213ENST00000519802 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
PCM1-213ENST00000519802 CLCN6P51797 869 aa15.2■□□□□ 0.02
PCM1-213ENST00000519802 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
PCM1-213ENST00000519802 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
PCM1-213ENST00000519802 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
PCM1-213ENST00000519802 PROM2Q8N271 834 aa15.11■□□□□ 0.01
PCM1-213ENST00000519802 LHX8Q68G74 356 aa15.1■□□□□ 0.01
PCM1-213ENST00000519802 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
PCM1-213ENST00000519802 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
PCM1-213ENST00000519802 PAK3O75914 559 aaPredicted RBP15.02■□□□□ -0
PCM1-213ENST00000519802 DCBLD2Q96PD2 775 aa15.02■□□□□ -0
PCM1-213ENST00000519802 GALR2O43603 387 aaPredicted RBP14.97□□□□□ -0.01
PCM1-213ENST00000519802 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
PCM1-213ENST00000519802 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
PCM1-213ENST00000519802 MIER1Q8N108 512 aa14.76□□□□□ -0.05
PCM1-213ENST00000519802 MS4A3Q96HJ5 214 aa14.76□□□□□ -0.05
PCM1-213ENST00000519802 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
PCM1-213ENST00000519802 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
PCM1-213ENST00000519802 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
PCM1-213ENST00000519802 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms