RNA–Protein interactions for RNA: ENST00000395309.7

KTN1-203, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KTN1, Length 4,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-203ENST00000395309 CHIC1Q5VXU3 224 aa7.05□□□□□ -1.28
KTN1-203ENST00000395309 AEBP2Q6ZN18 517 aaPredicted RBP6.85□□□□□ -1.31
KTN1-203ENST00000395309 PHF23Q9BUL5 403 aaPredicted RBP6.28□□□□□ -1.4
KTN1-203ENST00000395309 PLPPR3Q6T4P5 718 aa5.89□□□□□ -1.47
KTN1-203ENST00000395309 EHMT2Q96KQ7 1210 aa5.77□□□□□ -1.48
KTN1-203ENST00000395309 SENP3Q9H4L4 574 aaPredicted RBP5.68□□□□□ -1.5
KTN1-203ENST00000395309 KCNA4P22459 653 aa5.64□□□□□ -1.51
KTN1-203ENST00000395309 ADRA2BP18089 450 aa5.57□□□□□ -1.52
KTN1-203ENST00000395309 CSRNP3Q8WYN3 585 aa5.51□□□□□ -1.53
KTN1-203ENST00000395309 PPP6R1Q9UPN7 881 aa5.42□□□□□ -1.54
KTN1-203ENST00000395309 SLC4A1APQ9BWU0 796 aaKnown RBP5.42□□□□□ -1.54
KTN1-203ENST00000395309 POTEDQ86YR6 584 aa5.4□□□□□ -1.54
KTN1-203ENST00000395309 SLC24A1O60721 1099 aa5.4□□□□□ -1.55
KTN1-203ENST00000395309 FOXD1Q16676 465 aa5.27□□□□□ -1.57
KTN1-203ENST00000395309 PPP4R3CPQ6ZMV5 832 aa5.26□□□□□ -1.57
KTN1-203ENST00000395309 RTN4Q9NQC3 1192 aaKnown RBP5.26□□□□□ -1.57
KTN1-203ENST00000395309 ZBTB22O15209 634 aa5.21□□□□□ -1.57
KTN1-203ENST00000395309 NCBP3Q53F19 620 aaKnown RBP5.21□□□□□ -1.58
KTN1-203ENST00000395309 AMER1Q5JTC6 1135 aaPredicted RBP5.2□□□□□ -1.58
KTN1-203ENST00000395309 NPM3O75607 178 aaKnown RBP5.18□□□□□ -1.58
KTN1-203ENST00000395309 PIAS4Q8N2W9 510 aaPredicted RBP5.06□□□□□ -1.6
KTN1-203ENST00000395309 MSH5O43196 834 aa5.05□□□□□ -1.6
KTN1-203ENST00000395309 FOXD4L1Q9NU39 408 aa5.03□□□□□ -1.6
KTN1-203ENST00000395309 CNKSR2Q8WXI2 1034 aa5□□□□□ -1.61
KTN1-203ENST00000395309 FKBP8Q14318 412 aa4.94□□□□□ -1.62
KTN1-203ENST00000395309 DNAJC5BQ9UF47 199 aa4.91□□□□□ -1.62
KTN1-203ENST00000395309 SCAF1Q9H7N4 1312 aaKnown RBP4.9□□□□□ -1.63
KTN1-203ENST00000395309 MAPK8IP2Q13387 824 aaPredicted RBP4.82□□□□□ -1.64
KTN1-203ENST00000395309 RNF216Q9NWF9 866 aaPredicted RBP4.81□□□□□ -1.64
KTN1-203ENST00000395309 SLC4A2P04920 1241 aa4.8□□□□□ -1.64
KTN1-203ENST00000395309 PRKCSHP14314 528 aaPredicted RBP4.8□□□□□ -1.64
KTN1-203ENST00000395309 PLCB2Q00722 1185 aa4.8□□□□□ -1.64
KTN1-203ENST00000395309 ATXN8OSP0DMR3 200 aa4.79□□□□□ -1.64
KTN1-203ENST00000395309 MYCNP04198 464 aaPredicted RBP4.75□□□□□ -1.65
KTN1-203ENST00000395309 HAP1P54257 671 aaPredicted RBP4.74□□□□□ -1.65
KTN1-203ENST00000395309 BCANQ96GW7 911 aa4.74□□□□□ -1.65
KTN1-203ENST00000395309 TAOK2Q9UL54 1235 aa4.73□□□□□ -1.65
KTN1-203ENST00000395309 HOXD11P31277 338 aaPredicted RBP4.68□□□□□ -1.66
KTN1-203ENST00000395309 TPRNQ4KMQ1 711 aa4.66□□□□□ -1.66
KTN1-203ENST00000395309 VSIG10Q8N0Z9 540 aa4.65□□□□□ -1.66
KTN1-203ENST00000395309 ATF5Q9Y2D1 282 aaPredicted RBP4.65□□□□□ -1.67
KTN1-203ENST00000395309 DCAF8L2P0C7V8 631 aa4.65□□□□□ -1.67
KTN1-203ENST00000395309 DMRT2Q9Y5R5 561 aa4.61□□□□□ -1.67
KTN1-203ENST00000395309 FBXO3Q9UK99 471 aa4.61□□□□□ -1.67
KTN1-203ENST00000395309 KDM2AQ9Y2K7 1162 aa4.6□□□□□ -1.67
KTN1-203ENST00000395309 FBLN2P98095 1184 aa4.58□□□□□ -1.68
KTN1-203ENST00000395309 VASPP50552 380 aaPredicted RBP4.56□□□□□ -1.68
KTN1-203ENST00000395309 PKD2Q13563 968 aa4.56□□□□□ -1.68
KTN1-203ENST00000395309 IFNLR1Q8IU57 520 aaPredicted RBP4.56□□□□□ -1.68
KTN1-203ENST00000395309 TIMELESSQ9UNS1 1208 aa4.56□□□□□ -1.68
KTN1-203ENST00000395309 SPDYE4A6NLX3 237 aa4.53□□□□□ -1.68
KTN1-203ENST00000395309 TULP1O00294 542 aaPredicted RBP4.52□□□□□ -1.69
KTN1-203ENST00000395309 PAXIP1Q6ZW49 1069 aaPredicted RBP4.52□□□□□ -1.69
KTN1-203ENST00000395309 BBXQ8WY36 941 aaPredicted RBP4.52□□□□□ -1.69
KTN1-203ENST00000395309 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.52□□□□□ -1.69
KTN1-203ENST00000395309 DAXXQ9UER7 740 aaPredicted RBP4.52□□□□□ -1.69
KTN1-203ENST00000395309 CFAP44Q96MT7 982 aa4.51□□□□□ -1.69
KTN1-203ENST00000395309 NPM1P06748 294 aaKnown RBP eCLIP4.5□□□□□ -1.69
KTN1-203ENST00000395309 SAMD1Q6SPF0 538 aaPredicted RBP4.5□□□□□ -1.69
KTN1-203ENST00000395309 PROM2Q8N271 834 aa4.5□□□□□ -1.69
KTN1-203ENST00000395309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.49□□□□□ -1.69
KTN1-203ENST00000395309 HNRNPUL2Q1KMD3 747 aaKnown RBP4.49□□□□□ -1.69
KTN1-203ENST00000395309 ZNF219Q9P2Y4 722 aaPredicted RBP4.48□□□□□ -1.69
KTN1-203ENST00000395309 ARXQ96QS3 562 aa4.48□□□□□ -1.69
KTN1-203ENST00000395309 TSHZ2Q9NRE2 1034 aa4.47□□□□□ -1.69
KTN1-203ENST00000395309 GTF3C3Q9Y5Q9 886 aa4.47□□□□□ -1.69
KTN1-203ENST00000395309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.47□□□□□ -1.694e-7■■□□□ 12.6
KTN1-203ENST00000395309 U3KPZ7 1027 aaPredicted RBP4.46□□□□□ -1.7
KTN1-203ENST00000395309 MKRN4PQ13434 485 aaPredicted RBP4.45□□□□□ -1.7
KTN1-203ENST00000395309 ECM2O94769 699 aaPredicted RBP4.44□□□□□ -1.7
KTN1-203ENST00000395309 SPRYD3Q8NCJ5 442 aa4.44□□□□□ -1.7
KTN1-203ENST00000395309 DCAF8L1A6NGE4 600 aa4.42□□□□□ -1.7
KTN1-203ENST00000395309 NBR1Q14596 966 aa4.42□□□□□ -1.7
KTN1-203ENST00000395309 RGL2O15211 777 aa4.41□□□□□ -1.7
KTN1-203ENST00000395309 SPOCK2Q92563 424 aa4.4□□□□□ -1.71
KTN1-203ENST00000395309 KLHL34Q8N239 644 aa4.39□□□□□ -1.71
KTN1-203ENST00000395309 ERICH6Q7L0X2 663 aa4.38□□□□□ -1.71
KTN1-203ENST00000395309 DNAJC5Q9H3Z4 198 aa4.38□□□□□ -1.71
KTN1-203ENST00000395309 TMEM132AQ24JP5 1023 aa4.38□□□□□ -1.71
KTN1-203ENST00000395309 HOMEZQ8IX15 550 aa4.37□□□□□ -1.71
KTN1-203ENST00000395309 CHGAP10645 457 aaKnown RBP4.36□□□□□ -1.71
KTN1-203ENST00000395309 C14orf37Q86TY3 774 aa4.34□□□□□ -1.72
KTN1-203ENST00000395309 APLP2Q06481 763 aa4.32□□□□□ -1.72
KTN1-203ENST00000395309 PLCD3Q8N3E9 789 aa4.29□□□□□ -1.72
KTN1-203ENST00000395309 POLA2Q14181 598 aa4.28□□□□□ -1.72
KTN1-203ENST00000395309 CIZ1Q9ULV3 898 aaPredicted RBP4.28□□□□□ -1.72
KTN1-203ENST00000395309 HS6ST3Q8IZP7 471 aa4.27□□□□□ -1.73
KTN1-203ENST00000395309 TRHP20396 242 aaPredicted RBP4.26□□□□□ -1.73
KTN1-203ENST00000395309 STAG3Q9UJ98 1225 aa4.26□□□□□ -1.73
KTN1-203ENST00000395309 MIER1Q8N108 512 aa4.25□□□□□ -1.73
KTN1-203ENST00000395309 NKX1-1Q15270 411 aaPredicted RBP4.25□□□□□ -1.73
KTN1-203ENST00000395309 SUPT5HO00267 1087 aaKnown RBP4.24□□□□□ -1.73
KTN1-203ENST00000395309 GTPBP6O43824 516 aaPredicted RBP4.23□□□□□ -1.73
KTN1-203ENST00000395309 SPINK5Q9NQ38 1064 aaPredicted RBP4.23□□□□□ -1.73
KTN1-203ENST00000395309 RNF25Q96BH1 459 aaPredicted RBP4.23□□□□□ -1.73
KTN1-203ENST00000395309 PODXL2Q9NZ53 605 aa4.22□□□□□ -1.73
KTN1-203ENST00000395309 BRPF1P55201 1214 aaPredicted RBP4.2□□□□□ -1.74
KTN1-203ENST00000395309 TRIM41Q8WV44 630 aa4.2□□□□□ -1.74
KTN1-203ENST00000395309 RNF39Q9H2S5 420 aa4.2□□□□□ -1.74
KTN1-203ENST00000395309 ZNF692Q9BU19 519 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms