Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC106881.1-201ENST00000605849 3329 ntBASIC16.09■□□□□ 0.17
MT-ND3P03897 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 AC091951.1-201ENST00000512854 2465 ntBASIC16.09■□□□□ 0.17
MT-ND3P03897 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND3P03897 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.09■□□□□ 0.17
MT-ND3P03897 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND3P03897 SBF1P1-201ENST00000444527 5631 ntBASIC16.09■□□□□ 0.17
MT-ND3P03897 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MT-ND3P03897 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND3P03897 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND3P03897 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.08■□□□□ 0.17
MT-ND3P03897 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.08■□□□□ 0.17
MT-ND3P03897 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.08■□□□□ 0.17
MT-ND3P03897 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
MT-ND3P03897 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
MT-ND3P03897 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND3P03897 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MT-ND3P03897 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND3P03897 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
MT-ND3P03897 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MT-ND3P03897 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MT-ND3P03897 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 AC004461.1-201ENST00000412461 403 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 AC109635.5-201ENST00000533593 962 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 AC025678.2-201ENST00000562061 970 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND3P03897 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MT-ND3P03897 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-ND3P03897 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND3P03897 AC027612.4-201ENST00000605371 583 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 AC026120.1-201ENST00000611536 926 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MT-ND3P03897 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND3P03897 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND3P03897 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND3P03897 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-ND3P03897 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND3P03897 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
MT-ND3P03897 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND3P03897 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 AC073439.1-201ENST00000624121 1774 ntBASIC16.08■□□□□ 0.16
MT-ND3P03897 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-ND3P03897 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND3P03897 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
MT-ND3P03897 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-ND3P03897 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 AL671277.1-201ENST00000429656 993 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 AC023141.5-201ENST00000458585 616 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 RN7SL589P-201ENST00000481268 310 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MT-ND3P03897 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.07■□□□□ 0.16
MT-ND3P03897 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-ND3P03897 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 AC022145.2-201ENST00000598203 171 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 AL009183.1-201ENST00000603760 355 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 AL161645.1-201ENST00000622716 1255 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.07■□□□□ 0.16
MT-ND3P03897 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 WASH6P-202ENST00000359512 1437 ntBASIC16.07■□□□□ 0.16
MT-ND3P03897 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-ND3P03897 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms