Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 MIR6069-201ENST00000620069 79 ntBASIC16.33■□□□□ 0.2
ATP9BO43861 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.33■□□□□ 0.2
ATP9BO43861 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 AP002414.2-201ENST00000591780 3365 ntBASIC16.33■□□□□ 0.2
ATP9BO43861 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ATP9BO43861 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP9BO43861 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP9BO43861 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP9BO43861 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP9BO43861 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP9BO43861 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP9BO43861 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP9BO43861 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP9BO43861 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ATP9BO43861 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 AC134407.2-201ENST00000625089 1978 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ATP9BO43861 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 HIST3H2BA-201ENST00000436555 524 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 EEF1DP4-201ENST00000446006 880 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 SPTLC1P1-201ENST00000447199 261 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 AC243562.2-201ENST00000561247 970 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 AC004840.1-201ENST00000636359 365 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ATP9BO43861 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 AC126755.1-201ENST00000525846 6405 ntBASIC16.31■□□□□ 0.2
ATP9BO43861 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP9BO43861 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATP9BO43861 DBET-201ENST00000630918 3363 ntBASIC16.3■□□□□ 0.2
ATP9BO43861 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATP9BO43861 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP9BO43861 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
ATP9BO43861 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP9BO43861 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms