Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
KDELR3O43731 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.85■□□□□ 0.13
KDELR3O43731 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.85■□□□□ 0.13
KDELR3O43731 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.85■□□□□ 0.13
KDELR3O43731 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.85■□□□□ 0.13
KDELR3O43731 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.85■□□□□ 0.13
KDELR3O43731 DRD5P1-201ENST00000456605 1438 ntBASIC15.85■□□□□ 0.13
KDELR3O43731 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KDELR3O43731 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 AC098614.1-201ENST00000368528 745 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 RN7SL692P-201ENST00000464677 288 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.84■□□□□ 0.13
KDELR3O43731 GAPDHP40-201ENST00000505218 1006 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.84■□□□□ 0.13
KDELR3O43731 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.84■□□□□ 0.13
KDELR3O43731 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.84■□□□□ 0.13
KDELR3O43731 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.84■□□□□ 0.13
KDELR3O43731 AL596325.1-201ENST00000563991 1082 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.84■□□□□ 0.13
KDELR3O43731 WFDC1-204ENST00000613603 549 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 TMBIM7P-203ENST00000641617 1718 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.84■□□□□ 0.13
KDELR3O43731 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
KDELR3O43731 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
KDELR3O43731 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.84■□□□□ 0.13
KDELR3O43731 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KDELR3O43731 INTS4P2-202ENST00000614726 2019 ntBASIC15.84■□□□□ 0.13
KDELR3O43731 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KDELR3O43731 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KDELR3O43731 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KDELR3O43731 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
KDELR3O43731 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
KDELR3O43731 SSR4P1-203ENST00000599569 2260 ntBASIC15.83■□□□□ 0.13
KDELR3O43731 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.83■□□□□ 0.13
KDELR3O43731 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
KDELR3O43731 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
KDELR3O43731 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
KDELR3O43731 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.83■□□□□ 0.12
KDELR3O43731 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.83■□□□□ 0.12
KDELR3O43731 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KDELR3O43731 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.83■□□□□ 0.12
KDELR3O43731 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms