Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
XRCC2O43543 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.71□□□□□ -0.22
XRCC2O43543 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
XRCC2O43543 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
XRCC2O43543 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.71□□□□□ -0.22
XRCC2O43543 KRT8P12-202ENST00000472924 1397 ntBASIC13.71□□□□□ -0.22
XRCC2O43543 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
XRCC2O43543 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
XRCC2O43543 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
XRCC2O43543 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 TNRC18P2-201ENST00000417666 2714 ntBASIC13.7□□□□□ -0.22
XRCC2O43543 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
XRCC2O43543 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.7□□□□□ -0.22
XRCC2O43543 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.7□□□□□ -0.22
XRCC2O43543 MIR4453-201ENST00000584019 89 ntBASIC13.7□□□□□ -0.22
XRCC2O43543 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.7□□□□□ -0.22
XRCC2O43543 AL133215.2-201ENST00000609242 977 ntBASIC13.7□□□□□ -0.22
XRCC2O43543 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.7□□□□□ -0.22
XRCC2O43543 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 AC090616.6-203ENST00000579186 1945 ntBASIC13.7□□□□□ -0.22
XRCC2O43543 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
XRCC2O43543 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
XRCC2O43543 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 CETN4P-206ENST00000642099 2168 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.69□□□□□ -0.22
XRCC2O43543 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 MIR1233-2-201ENST00000408138 82 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 MIR1233-1-201ENST00000408722 82 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
XRCC2O43543 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.69□□□□□ -0.22
XRCC2O43543 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.69□□□□□ -0.22
XRCC2O43543 SERBP1P3-201ENST00000459980 809 ntBASIC13.69□□□□□ -0.22
XRCC2O43543 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms