Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.06■□□□□ 0
PDLIM1O00151 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.06■□□□□ 0
PDLIM1O00151 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.06■□□□□ 0
PDLIM1O00151 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 OR7E47P-204ENST00000575924 449 ntBASIC15.06■□□□□ 0
PDLIM1O00151 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 AC004790.2-201ENST00000623588 572 ntBASIC15.06■□□□□ 0
PDLIM1O00151 AP001350.2-201ENST00000625104 1094 ntBASIC15.06■□□□□ 0
PDLIM1O00151 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM1O00151 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PDLIM1O00151 PI4KAP1-204ENST00000612579 1703 ntBASIC15.06■□□□□ 0
PDLIM1O00151 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.05■□□□□ 0
PDLIM1O00151 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.05■□□□□ 0
PDLIM1O00151 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDLIM1O00151 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.05■□□□□ 0
PDLIM1O00151 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
PDLIM1O00151 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
PDLIM1O00151 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.05■□□□□ 0
PDLIM1O00151 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.05■□□□□ 0
PDLIM1O00151 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM1O00151 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM1O00151 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.05■□□□□ 0
PDLIM1O00151 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
PDLIM1O00151 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDLIM1O00151 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.05■□□□□ 0
PDLIM1O00151 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.05■□□□□ -0
PDLIM1O00151 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 HAUS4P1-201ENST00000406739 1145 ntBASIC15.05■□□□□ -0
PDLIM1O00151 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PDLIM1O00151 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.05■□□□□ -0
PDLIM1O00151 AC107918.2-201ENST00000530817 355 ntBASIC15.05■□□□□ -0
PDLIM1O00151 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.05■□□□□ -0
PDLIM1O00151 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.05■□□□□ -0
PDLIM1O00151 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.05■□□□□ -0
PDLIM1O00151 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
PDLIM1O00151 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
PDLIM1O00151 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.05■□□□□ -0
PDLIM1O00151 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDLIM1O00151 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms