Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AGAP7P-201ENST00000582299 2062 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AGAP14-201ENST00000624701 2060 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AC144831.1-201ENST00000573312 2656 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TSSK5P-201ENST00000423978 907 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 AC004461.2-201ENST00000629517 803 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 HYMAI-201ENST00000635591 3347 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 KRT18P28-201ENST00000453838 1332 ntBASIC13.86□□□□□ -0.19
NPIPB4C9JG80 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NPIPB4C9JG80 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AL596257.1-201ENST00000641463 2694 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TREML5P-201ENST00000421694 576 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TIMM17BP1-201ENST00000545713 516 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AC044860.1-202ENST00000559481 777 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.85□□□□□ -0.19
NPIPB4C9JG80 AC025181.2-201ENST00000606994 802 ntBASIC13.85□□□□□ -0.19
NPIPB4C9JG80 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms