Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AP000437.1-201ENST00000624057 2085 ntBASIC12.02□□□□□ -0.49
COLCA2A8K830 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
COLCA2A8K830 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.02□□□□□ -0.49
COLCA2A8K830 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.02□□□□□ -0.49
COLCA2A8K830 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
COLCA2A8K830 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.02□□□□□ -0.49
COLCA2A8K830 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.02□□□□□ -0.49
COLCA2A8K830 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
COLCA2A8K830 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
COLCA2A8K830 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.02□□□□□ -0.49
COLCA2A8K830 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
COLCA2A8K830 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.02□□□□□ -0.49
COLCA2A8K830 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.01□□□□□ -0.49
COLCA2A8K830 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.01□□□□□ -0.49
COLCA2A8K830 AL353807.1-201ENST00000427475 662 ntBASIC12.01□□□□□ -0.49
COLCA2A8K830 PEMT-206ENST00000435340 960 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.01□□□□□ -0.49
COLCA2A8K830 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.01□□□□□ -0.49
COLCA2A8K830 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 POM121L4P-202ENST00000427789 1891 ntBASIC12.01□□□□□ -0.49
COLCA2A8K830 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.01□□□□□ -0.49
COLCA2A8K830 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
COLCA2A8K830 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
COLCA2A8K830 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
COLCA2A8K830 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.01□□□□□ -0.49
COLCA2A8K830 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
COLCA2A8K830 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
COLCA2A8K830 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
COLCA2A8K830 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
COLCA2A8K830 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
COLCA2A8K830 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12□□□□□ -0.49
COLCA2A8K830 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms