Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00473A8K010 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 AC004461.1-201ENST00000412461 403 ntBASIC12.8□□□□□ -0.36
LINC00473A8K010 AL627223.1-201ENST00000416693 442 ntBASIC12.8□□□□□ -0.36
LINC00473A8K010 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00473A8K010 AL513210.1-201ENST00000629608 234 ntBASIC12.8□□□□□ -0.36
LINC00473A8K010 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00473A8K010 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00473A8K010 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00473A8K010 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00473A8K010 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.8□□□□□ -0.36
LINC00473A8K010 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00473A8K010 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 PKD1P5-201ENST00000532415 10291 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 LINC01101-201ENST00000622953 1884 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 GPS2P2-201ENST00000430745 888 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 HIST3H2BA-201ENST00000436555 524 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00473A8K010 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 MIR4469-201ENST00000583919 79 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AC003101.2-201ENST00000612557 442 ntBASIC12.79□□□□□ -0.36
LINC00473A8K010 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00473A8K010 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00473A8K010 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00473A8K010 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms