Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 RPL5P21-201ENST00000404620 815 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 KRT18P64-201ENST00000434946 1219 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC015910.1-201ENST00000579400 975 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC009090.5-201ENST00000624886 2285 ntBASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CCDC196A0A1B0GTZ2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 FAM8A3P-201ENST00000427218 844 ntBASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 KRT18P43-201ENST00000469825 1281 ntBASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC196A0A1B0GTZ2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 MEIS3P1-201ENST00000495167 958 ntBASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC004840.1-201ENST00000636359 365 ntBASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms