Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-7A0A0A0MS04 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 TFAMP1-201ENST00000412727 736 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL645939.2-201ENST00000427340 991 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL671277.1-201ENST00000429656 993 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL591424.1-201ENST00000442569 1213 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 RNA5SP416-201ENST00000516838 111 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 FAM86C2P-203ENST00000528684 1004 ntBASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-7A0A0A0MS04 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL359183.1-201ENST00000623796 2132 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 IL9RP2-201ENST00000423948 1312 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 KRT8P37-201ENST00000451609 1420 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC136759.1-202ENST00000530858 2194 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 EEF1DP4-201ENST00000446006 880 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AL139010.1-201ENST00000454878 894 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 PHKG1P2-201ENST00000457537 863 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 RN7SL589P-201ENST00000481268 310 ntBASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRBV6-7A0A0A0MS04 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms