Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 AL450472.2-201ENST00000603663 1156 ntBASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 AC148477.8-201ENST00000624298 468 ntBASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AC005912.2-201ENST00000619492 2400 ntBASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AC098831.1-202ENST00000438821 336 ntBASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AC009947.1-201ENST00000444350 727 ntBASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms