Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 AC124283.3-201ENST00000570869 594 ntBASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 AL513477.1-201ENST00000602865 2407 ntBASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
NCKAP1Q9Y2A7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 KLF2P4-201ENST00000451959 1225 ntBASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 AC068587.3-201ENST00000526613 355 ntBASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 AC000095.1-201ENST00000603208 874 ntBASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 MIR6799-201ENST00000620297 69 ntBASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCKAP1Q9Y2A7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NCKAP1Q9Y2A7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms