Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 FO393414.2-201ENST00000405153 598 ntBASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 AC098850.1-201ENST00000419919 790 ntBASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 TMEM14DP-201ENST00000422205 345 ntBASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 TIMM17BP1-201ENST00000545713 516 ntBASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AL133338.1-201ENST00000565695 1517 ntBASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 FAM86MP-201ENST00000340703 885 ntBASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 HAUS4P1-201ENST00000406739 1145 ntBASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 BTNL10-201ENST00000595971 695 ntBASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN3Q9UPQ7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 AC022532.1-201ENST00000624563 1728 ntBASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 AL589987.1-201ENST00000453380 819 ntBASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 REXO1L6P-201ENST00000603433 1515 ntBASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.22■□□□□ 0.83
PDZRN3Q9UPQ7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms