Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.03■□□□□ -0
LHX6Q9UPM6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LHX6Q9UPM6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LHX6Q9UPM6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.02■□□□□ -0
LHX6Q9UPM6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.02■□□□□ -0
LHX6Q9UPM6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AL442647.2-201ENST00000429864 857 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC15.02■□□□□ -0
LHX6Q9UPM6 MTCYBP11-201ENST00000447254 1109 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.02■□□□□ -0
LHX6Q9UPM6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.02■□□□□ -0
LHX6Q9UPM6 MIR3619-201ENST00000579667 83 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.02■□□□□ -0
LHX6Q9UPM6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LHX6Q9UPM6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.02■□□□□ -0
LHX6Q9UPM6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LHX6Q9UPM6 AP003419.4-201ENST00000616071 517 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LHX6Q9UPM6 AC008687.7-202ENST00000637404 953 ntBASIC15.02■□□□□ -0
LHX6Q9UPM6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 FER1L4-210ENST00000615531 5998 ntBASIC15.02□□□□□ -0.01
LHX6Q9UPM6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
LHX6Q9UPM6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 GCNT6-201ENST00000379591 934 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AC007969.1-201ENST00000433675 447 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AC004898.1-201ENST00000451057 766 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 RN7SL399P-201ENST00000471648 279 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AC012181.2-201ENST00000570210 699 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AC026979.3-201ENST00000607315 403 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AC074044.1-201ENST00000609673 707 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 AL138960.2-201ENST00000625145 535 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 LINC02199-201ENST00000506655 2702 ntBASIC15.01□□□□□ -0.01
LHX6Q9UPM6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LHX6Q9UPM6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms