Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 AC022137.2-201ENST00000503482 481 ntBASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHPF2Q9P2E5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 BOLA2P3-201ENST00000404566 256 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 AL355864.2-201ENST00000447420 863 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 KRT223P-202ENST00000449164 1292 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 CTBP2P5-201ENST00000454986 1264 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 AC104989.1-201ENST00000519711 778 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 GNRHR2-203ENST00000581100 1187 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 AC092850.2-201ENST00000623821 2697 ntBASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHPF2Q9P2E5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 AC093525.8-201ENST00000624099 1342 ntBASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 RPS2P32-201ENST00000439199 892 ntBASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 FTH1P14-201ENST00000482930 551 ntBASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 AC244669.2-201ENST00000612320 853 ntBASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.79■□□□□ 0.76
CHPF2Q9P2E5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHPF2Q9P2E5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms