Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AC138028.6-201ENST00000616106 1482 ntBASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AC090340.1-201ENST00000620778 4980 ntBASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 FXNP2-201ENST00000411625 547 ntBASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AC091804.1-201ENST00000486888 567 ntBASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM7Q9NR12 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
PDLIM7Q9NR12 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PDLIM7Q9NR12 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.39■□□□□ 0.38
PDLIM7Q9NR12 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
PDLIM7Q9NR12 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 AL121723.1-201ENST00000445194 1519 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 AC006001.1-201ENST00000325130 474 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 AC005077.2-201ENST00000449786 690 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 AP006547.1-201ENST00000563435 692 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 MIR4741-201ENST00000579822 90 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM7Q9NR12 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms