Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TCAF1P1-201ENST00000414990 2232 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 KRT8P39-201ENST00000396270 1433 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 SLC22A20-204ENST00000530038 1673 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AL359881.3-201ENST00000602640 1721 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC027601.5-201ENST00000624065 2482 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC243591.1-201ENST00000452967 1364 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC126365.1-201ENST00000578585 1514 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TSPY19P-201ENST00000418461 509 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TSPY18P-201ENST00000441642 509 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC091304.2-201ENST00000564639 760 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TERC-201ENST00000602385 541 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AL589182.2-201ENST00000619332 1049 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AL355877.3-201ENST00000622820 899 ntBASIC14.38□□□□□ -0.11
HMG20AQ9NP66 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMG20AQ9NP66 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.37□□□□□ -0.11
HMG20AQ9NP66 BX640514.1-201ENST00000583223 1918 ntBASIC14.37□□□□□ -0.11
HMG20AQ9NP66 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms