Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 AC148477.4-201ENST00000613430 1793 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 AC084364.1-201ENST00000551967 1556 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.03■□□□□ -0
BRF2Q9HAW0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
BRF2Q9HAW0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
BRF2Q9HAW0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
BRF2Q9HAW0 MIR1233-2-201ENST00000408138 82 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 MIR1233-1-201ENST00000408722 82 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.03■□□□□ -0
BRF2Q9HAW0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.03■□□□□ -0
BRF2Q9HAW0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 AC025678.2-201ENST00000562061 970 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.03■□□□□ -0
BRF2Q9HAW0 AC025048.3-201ENST00000590609 569 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 AC005702.4-201ENST00000618393 416 ntBASIC15.03■□□□□ -0
BRF2Q9HAW0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.03■□□□□ -0
BRF2Q9HAW0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.03■□□□□ -0
BRF2Q9HAW0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.02■□□□□ -0
BRF2Q9HAW0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.02■□□□□ -0
BRF2Q9HAW0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.02■□□□□ -0
BRF2Q9HAW0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 DBET-201ENST00000630918 3363 ntBASIC15.02■□□□□ -0
BRF2Q9HAW0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 AC074338.1-201ENST00000416825 156 ntBASIC15.02■□□□□ -0
BRF2Q9HAW0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.02■□□□□ -0
BRF2Q9HAW0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
BRF2Q9HAW0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.02■□□□□ -0
BRF2Q9HAW0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.02■□□□□ -0
BRF2Q9HAW0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRF2Q9HAW0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 TUBB3P1-201ENST00000405796 1332 ntBASIC15.01□□□□□ -0.01
BRF2Q9HAW0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRF2Q9HAW0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms