Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AC023024.2-201ENST00000623561 1993 ntBASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 KRT18P43-201ENST00000469825 1281 ntBASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AL390754.1-201ENST00000619088 582 ntBASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.54■□□□□ 0.4
CCSER1Q9C0I3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCSER1Q9C0I3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 AC000095.1-201ENST00000603208 874 ntBASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 AC008738.7-201ENST00000609744 511 ntBASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 AL645728.2-202ENST00000641679 227 ntBASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCSER1Q9C0I3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CCSER1Q9C0I3 MROH4P-201ENST00000431302 1578 ntBASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms