Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 SART3-203ENST00000546611 1184 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 AC139887.3-201ENST00000568585 713 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 AL365330.1-201ENST00000607459 531 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 REXO1L6P-202ENST00000619970 1078 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 AL928921.2-201ENST00000641325 2442 ntBASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP6Q96FZ7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 FAM8A3P-201ENST00000427218 844 ntBASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 FGFR3P6-201ENST00000457012 610 ntBASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 AL589182.2-201ENST00000619332 1049 ntBASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
CHMP6Q96FZ7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
CHMP6Q96FZ7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP6Q96FZ7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms