Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.71■□□□□ 0.26
DDX1Q92499 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
DDX1Q92499 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.7■□□□□ 0.26
DDX1Q92499 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TNRC18P2-201ENST00000417666 2714 ntBASIC16.7■□□□□ 0.26
DDX1Q92499 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
DDX1Q92499 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 AC084364.1-201ENST00000551967 1556 ntBASIC16.7■□□□□ 0.26
DDX1Q92499 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
DDX1Q92499 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 U91328.1-201ENST00000437528 223 ntBASIC16.7■□□□□ 0.26
DDX1Q92499 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.7■□□□□ 0.26
DDX1Q92499 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.7■□□□□ 0.26
DDX1Q92499 SLED1-202ENST00000512051 380 ntBASIC16.7■□□□□ 0.26
DDX1Q92499 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.7■□□□□ 0.26
DDX1Q92499 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.7■□□□□ 0.26
DDX1Q92499 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.7■□□□□ 0.26
DDX1Q92499 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DDX1Q92499 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.7■□□□□ 0.26
DDX1Q92499 AC087499.5-201ENST00000452760 1342 ntBASIC16.7■□□□□ 0.26
DDX1Q92499 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 AC027369.6-201ENST00000525520 931 ntBASIC16.69■□□□□ 0.26
DDX1Q92499 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.69■□□□□ 0.26
DDX1Q92499 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms