Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC44A1Q8WWI5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AZGP1P1-201ENST00000411909 902 ntBASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 SPCS2P4-201ENST00000436160 681 ntBASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 BX640515.1-201ENST00000617215 977 ntBASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AC092902.6-201ENST00000641783 218 ntBASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC44A1Q8WWI5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC44A1Q8WWI5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 FAM8A3P-201ENST00000427218 844 ntBASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 RNA5SP416-201ENST00000516838 111 ntBASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC44A1Q8WWI5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC44A1Q8WWI5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms