Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 AC114501.2-201ENST00000439631 535 ntBASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 MIR4313-201ENST00000580760 101 ntBASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB42Q8N4Z0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AC018695.7-201ENST00000624587 2492 ntBASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AC015922.1-201ENST00000421102 1152 ntBASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 AL096865.1-201ENST00000606796 927 ntBASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB42Q8N4Z0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB42Q8N4Z0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms