Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SPDYE10P-202ENST00000612005 668 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 SPDYE8P-202ENST00000612377 668 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AC092902.6-201ENST00000641783 218 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AC105250.1-201ENST00000509378 2057 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 REXO1L1P-202ENST00000608646 1974 ntBASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 AC142381.1-201ENST00000426099 345 ntBASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 IGHV3-62-201ENST00000520057 340 ntBASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC50Q8IVM0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC023908.3-201ENST00000564211 3047 ntBASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AL109954.1-202ENST00000564051 2148 ntBASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC50Q8IVM0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC50Q8IVM0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms