Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AL157414.3-201ENST00000624276 1954 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC112504.1-201ENST00000623415 1841 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC079178.1-201ENST00000420915 656 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC007663.3-201ENST00000609632 465 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 LINC02447-202ENST00000501888 2146 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MARK2P5-201ENST00000507649 634 ntBASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC9.47□□□□□ -0.89
VPS13BQ7Z7G8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC004899.1-201ENST00000424687 1714 ntBASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC097065.1-201ENST00000425737 517 ntBASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC244157.2-201ENST00000616239 1006 ntBASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC092127.1-201ENST00000567093 3455 ntBASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.46□□□□□ -0.89
VPS13BQ7Z7G8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AC009093.2-202ENST00000620513 2079 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms